Senior Director, Financial Planning and Analysis (FP&A)

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📍 South San Francisco, California, United States💰 USD 250K–290K

About this role

Encoded Therapeutics is a clinical-stage biotechnology company developing precision genetic medicines to transform the lives of patients with severe neurological disorders. The company’s vector engineering platform enables potent and cell-type-selective regulation of gene expression, allowing for targeted modulation of disease-relevant genes. Encoded is advancing a pipeline of programs across genetic epilepsies and other neurological disorders with significant unmet need. With integrated discovery, development, and manufacturing capabilities, Encoded is positioned to efficiently move programs from concept through the clinic. Encoded is driven by a mission to meaningfully improve the lives of patients and families affected by devastating neurological disorders. For more information, please visit www.encoded.com.

We are seeking a high-caliber Senior Director, FP&A to serve as a strategic architect of our financial roadmap. You will be the primary bridge between clinical innovation and financial sustainability. Not only will you manage the numbers but also synthesize complex data into actionable insights for the Leadership Team and Board of Directors, directly influencing the company’s overall business strategy and clinical program investments.

This role is based in South San Francisco and reports to the Vice President, Finance.

Responsibilities:

  • Strategic Financial Planning: Lead end-to-end annual operating plan, quarterly forecasting (Latest Estimate), Long Range Plan and Scenario Planning processes. Conduct rigorous sensitivity and risk analyses to guide executive decision-making. Establish Commercial Planning process, including P&L modeling, demand planning and competitive analysis.
  • R&D CMC Business Partnership: Act as the dedicated finance lead for R&D and Manufacturing functions. Collaborate on complex clinical study accruals and build robust modeling frameworks to track program-level performance against budgets.
  • Corporate Dashboards & KPIs: Develop and maintain corporate dashboards to track performance against key clinical, program, and operational milestones.
  • Infrastructure Scaling: Build out the FP&A team’s infrastructure to enable flexible forecast modeling, streamlined management reporting, cash forecasting and clinical trial study analytics and reporting
  • Corporate Development Support: Provide financial modeling and due diligence support for M&A, licensing, and clinical investment decisions
  • Cross-Functional Stewardship: Serve as the financial gatekeeper for contract requests via Coupa and act as the primary System Administrator for Adaptive, ensuring the integrity of our planning tools
  • Governance & Compliance: Advise internal stakeholders on corporate policies and compliance to ensure proper GAAP treatment of expenses throughout the organization.
  • Education: Bachelor’s Degree required, Master's degree preferred.
  • Experience: 15+ years of progressive financial management experience, 5+ years building and managing high-performing teams.
  • Industry Expertise: Proven experience in the Biotech/Life Science industry, specifically R&D, Clinical Trial, and Commercial Planning.
  • Systems and Tools: Proficiency with NetSuite, Coupa and Adaptive required.
  • Communication: Strong verbal and written communication skills with previous experience supporting BoD level audiences.
  • Leadership: Strong ability to lead through change and communicate complex financial concepts to diverse stakeholders.

For candidates based in the SFB area, the salary range for this position is: $250,000 to $290,000.

  • Comprehensive benefits package, including competitive employer premium contributions
  • Meaningful stock option grants
  • PTO, sick time, and holiday pay
  • Generous Parental Leave program
  • Pre-tax medical and dependent care programs
  • STD, LTD, Life and AD&D
  • Professional development opportunities
  • Team-building events
  • Fully stocked kitchen
  • Fitness center at our SF office

Employees (and their families) may obtain medical, dental, vision and basic life insurance benefits through the company and enroll in our company’s 401k plan. Employees will also accrue vacation time off and paid sick time off and may become eligible for paid parental leave. Employees will also enjoy designated paid holidays throughout the calendar year.

Encoded is an Equal Opportunity Employer and prohibits discrimination and harassment of any kind. Encoded is committed to the principle of equal employment opportunity for all employees and to providing employees with a work environment free of discrimination and harassment. All employment decisions at Encoded are based on business needs, job requirements and individual qualifications, without regard to race, religion or belief, color, national origin, gender, status as a protected veteran, status as an individual with a disability, or any other status protected by the laws or regulations in the location in which we operate. Encoded will not tolerate discrimination or harassment based on any of these characteristics. Encoded encourages applicants of all ages.

If you need assistance or an accommodation due to a disability, you may call us at +1 650-491-0272.

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Frequently Asked Questions

What is the salary for the Senior Director, Financial Planning and Analysis (FP&A) role at Encoded Therapeutics?
The listed salary for this Senior Director, Financial Planning and Analysis (FP&A) position at Encoded Therapeutics is USD 250K–290K. This is an full-time role.
Where is the Senior Director, Financial Planning and Analysis (FP&A) position at Encoded Therapeutics located?
This Senior Director, Financial Planning and Analysis (FP&A) role at Encoded Therapeutics is based in South San Francisco, California, United States. The position is listed as on-site or hybrid. Check the full job description or apply directly to confirm the work arrangement.
Which team or department does the Senior Director, Financial Planning and Analysis (FP&A) at Encoded Therapeutics belong to?
This Senior Director, Financial Planning and Analysis (FP&A) position is part of the Finance department at Encoded Therapeutics. See the full job description for more information about the team structure and responsibilities.
How do I apply for the Senior Director, Financial Planning and Analysis (FP&A) position at Encoded Therapeutics?
Click the "Apply Now" button on this page. You will be redirected to Encoded Therapeutics's official application portal hosted on workable where you can submit your application directly.
When was the Senior Director, Financial Planning and Analysis (FP&A) job at Encoded Therapeutics posted?
This Senior Director, Financial Planning and Analysis (FP&A) position at Encoded Therapeutics was posted on May 20, 2026. Apply as soon as possible — early applications are often reviewed first.
Senior Director, Financial Planning and Analysis (FP&A)
Encoded Therapeutics · 💰 USD 250K–290K
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